SMTL ID : 3vd6.1

Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P21 Crystal Form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: T.9, C.10 Chain C: R.3, W.16 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.3

3 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain C: C.5, C.8, C.26, C.29 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.5, C:C.8, C:C.26, C:C.29 ZN.3: 6 residues within 4Å: Chain C: C.59, C.62, T.64, C.80, C.83, R.94 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.59, C:C.62, C:C.80, C:C.83 ZN.4: 2 residues within 4Å: Chain C: D.19, H.23 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.19, C:H.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilkinson-White, L. et al., GATA1 directly mediates interactions with closely spaced pseudopalindromic but not distantly spaced double GATA sites on DNA. Protein Sci. (2015)

Release Date

2013-01-16

Peptides

Erythroid transcription factor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
C

Erythroid transcription factor

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