SMTL ID : 3vek.2 (1 other biounit)

Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

monomer

Ligands

8 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 3 residues within 4Å: Chain A: C.5, T.6 Chain C: H.90 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.90 ZN.2: 1 residues within 4Å: Chain A: G.15 No protein-ligand interaction detected (PLIP) ZN.3: 1 residues within 4Å: Chain B: G.18 No protein-ligand interaction detected (PLIP) ZN.4: 4 residues within 4Å: Chain C: C.5, C.8, C.26, C.29 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.5, C:C.8, C:C.26, C:C.29 ZN.5: 5 residues within 4Å: Chain C: C.59, C.62, T.64, C.80, C.83 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.59, C:C.62, C:C.80, C:C.83 ZN.6: 1 residues within 4Å: Chain C: H.33 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.33 ZN.7: 1 residues within 4Å: Chain C: E.4 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.4 ZN.8: 3 residues within 4Å: Chain C: D.19, T.21, H.23 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.19, C:H.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilkinson-White, L. et al., GATA1 directly mediates interactions with closely spaced pseudopalindromic but not distantly spaced double GATA sites on DNA. Protein Sci. (2015)

Release Date

2013-01-16

Peptides

Erythroid transcription factor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
F

Erythroid transcription factor

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