SMTL ID : 3wjn.1

Crystal structure of Octaprenyl Pyrophosphate synthase from Escherichia coli with farnesyl S-thiol-pyrophosphate (FSPP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x FPS: S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE(Non-covalent)

FPS.1: 13 residues within 4Å: Chain A: A.93, T.94, H.97, D.98, D.102, R.107, Y.130, I.156, E.160, K.184, K.249 Chain B: D.127, T.131 13 PLIP interactions: 11 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:A.93, A:T.94, A:H.97, A:Y.130, A:I.156, A:E.160, A:K.184, A:K.184, B:D.127, B:T.131 Hydrogen bonds: A:D.98, A:D.102, A:R.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, X. et al., Crystal structures of ligand-bound octaprenyl pyrophosphate synthase from Escherichia coli reveal the catalytic and chain-length determining mechanisms. Proteins (2015)

Release Date

2014-06-18

Peptides

Octaprenyl diphosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Octaprenyl diphosphate synthase

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