SMTL ID : 3zgo.1 (2 other biounits)

Re-refined structure of the human Sirt2 apoform

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.164, C.169, C.190, C.193 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.164, A:C.169, A:C.190, A:C.193

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.2: 7 residues within 4Å: Chain A: R.122, I.144, A.145, G.146, E.148, R.316, E.317 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.122, A:R.122, A:R.316

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 5 residues within 4Å: Chain A: Y.83, E.85, E.89, F.204, G.205 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 3 residues within 4Å: Chain A: V.202, F.203, F.204 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.203 Water bridges: A:G.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moniot, S. et al., Crystal Structure Analysis of Human Sirt2 and its Adp-Ribose Complex. J.Struct.Biol. (2013)

Release Date

2013-03-20

Peptides

NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2

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