SMTL ID : 3zkm.2 (1 other biounit)

BACE2 FAB COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: E.86, L.100, V.101, N.102, E.138, S.143, Q.147 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.101, A:N.102, A:Q.147 Water bridges: A:K.67 Salt bridges: A:K.67

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: P.256, F.262, Q.267, C.270, W.271 2 PLIP interactions: 2 interactions with chain A pi-Cation interactions: A:F.262, A:W.271

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain B: R.38, K.43, E.46, A.62, F.63, R.66, Q.86 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:R.38, B:K.43, B:E.46, B:A.62, B:R.66 Water bridges: B:Q.86, B:Q.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Banner, D.W. et al., Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-05-29

Peptides

BETA-SECRETASE 2: A
FAB HEAVY CHAIN: B
FAB LIGHT CHAIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

BETA-SECRETASE 2

FAB HEAVY CHAIN

FAB LIGHT CHAIN

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