SMTL ID : 3zp1.1

INFLUENZA VIRUS (VN1194) H5 HA with LSTc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-3-3-mer

Ligands

3 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-2)-beta-D-galactopyranose(Non-covalent)

GAL-SIA.1: 11 residues within 4Å: Chain A: Y.91, L.129, V.131, S.132, S.133, W.149, H.179, E.186, L.190, Q.222, G.224 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:V.131, A:V.131, A:S.133, A:H.179, A:Q.222, A:Q.222, A:G.224 GAL-SIA.2: 11 residues within 4Å: Chain C: Y.91, L.129, V.131, S.132, S.133, W.149, H.179, E.186, L.190, Q.222, G.224 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:V.131, C:V.131, C:S.133, C:H.179, C:Q.222, C:Q.222, C:G.224 GAL-SIA.3: 11 residues within 4Å: Chain E: Y.91, L.129, V.131, S.132, S.133, W.149, H.179, E.186, L.190, Q.222, G.224 7 PLIP interactions: 7 interactions with chain E Hydrogen bonds: E:V.131, E:V.131, E:S.133, E:H.179, E:Q.222, E:Q.222, E:G.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crusat, M. et al., Changes in the Hemagglutinin of H5N1 Viruses During Human Infection - Influence on Receptor Binding. Virology (2013)

Release Date

2013-10-02

Peptides

HAEMAGGLUTININ: ACE
HAEMAGGLUTININ: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
E

E
E

B
F

D
F

F
F

HAEMAGGLUTININ

HAEMAGGLUTININ

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