SMTL ID : 3zr0.1 (1 other biounit)

Crystal structure of human MTH1 in complex with 8-oxo-dGMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 8OG: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

8OG.1: 14 residues within 4Å: Chain A: Y.7, T.8, L.9, K.23, F.27, N.33, G.36, G.37, F.72, M.81, W.117, D.119, D.120, W.123 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.33, A:N.33, A:G.36 Water bridges: A:K.23, A:F.27, A:K.38 Salt bridges: A:K.23, A:D.119, A:D.120 pi-Stacking: A:W.117, A:W.117

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: H.65, K.66 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.66 Water bridges: A:L.64 Salt bridges: A:H.65, A:K.66, A:K.132 SO4.3: 5 residues within 4Å: Chain A: A.63, H.65, T.88, D.89, S.90 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.89 Salt bridges: A:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Svensson, L.M. et al., Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex. FEBS Lett. (2011)

Release Date

2011-07-27

Peptides

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE

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