SMTL ID : 3zxd.3 (3 other biounits)

wild-type lysenin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: E.21, Y.23, V.24 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.24

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: K.248, D.256 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.256 MG.3: 1 residues within 4Å: Chain A: E.21 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Colibus, L. et al., Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition. Structure (2012)

Release Date

2012-09-19

Peptides

LYSENIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

LYSENIN

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