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SMTL ID : 4ah4.1
(1 other biounit)
Crystal Structure of Fucose binding lectin from Aspergillus Fumigatus (AFL) in complex with BGA Oligosaccharide.
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.75 Å
Oligo State
monomer
Ligands
5 x
GAL
-
FUC
-
A2G
:
alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose
(Non-covalent)
GAL-FUC-A2G.1:
9 residues within 4Å:
Chain A:
R.25
,
E.37
,
L.39
,
E.41
,
N.46
,
L.69
,
I.72
,
Y.88
,
W.94
1
PLIP interactions
:
1 interactions with chain A
Hydrophobic interactions:
A:L.39
,
A:E.41
,
A:I.72
,
A:Y.88
Hydrogen bonds:
A:N.46
,
A:R.25
,
A:E.37
Water bridges:
A:W.94
,
A:Y.88
GAL-FUC-A2G.2:
10 residues within 4Å:
Chain A:
R.73
,
E.85
,
Y.95
,
G.97
,
G.98
,
L.99
,
L.123
,
L.125
,
W.141
,
W.146
6
PLIP interactions
:
6 interactions with chain A
Hydrogen bonds:
A:G.98
,
A:R.73
,
A:E.85
,
A:G.98
,
A:L.99
Hydrophobic interactions:
A:L.123
,
A:L.125
GAL-FUC-A2G.3:
7 residues within 4Å:
Chain A:
Y.168
,
R.177
,
Q.189
,
Y.199
,
I.227
,
M.229
,
W.245
2
PLIP interactions
:
2 interactions with chain A
Hydrophobic interactions:
A:W.245
,
A:I.227
,
A:W.245
Hydrogen bonds:
A:Y.168
,
A:R.177
,
A:Q.189
,
A:Q.189
Water bridges:
A:Y.199
,
A:Y.168
,
A:Y.168
GAL-FUC-A2G.4:
10 residues within 4Å:
Chain A:
R.230
,
Q.242
,
C.244
,
K.249
,
H.252
,
D.253
,
F.274
,
P.279
,
L.281
,
W.299
9
PLIP interactions
:
9 interactions with chain A
Hydrophobic interactions:
A:K.249
,
A:F.274
,
A:P.279
,
A:L.281
,
A:W.299
Hydrogen bonds:
A:D.253
,
A:R.230
,
A:Q.242
,
A:Q.242
Water bridges:
A:D.246
,
A:H.252
,
A:D.253
,
A:W.299
GAL-FUC-A2G.5:
9 residues within 4Å:
Chain A:
N.22
,
L.24
,
Y.40
,
W.44
,
R.282
,
E.296
,
V.298
,
N.300
,
H.303
4
PLIP interactions
:
4 interactions with chain A
Hydrogen bonds:
A:N.300
,
A:H.303
,
A:R.282
,
A:E.296
,
A:R.309
,
A:Y.40
Hydrophobic interactions:
A:N.22
,
A:Y.40
Water bridges:
A:W.44
,
A:N.300
,
A:R.282
,
A:R.282
,
A:R.282
1 x
FUC
:
alpha-L-fucopyranose
(Non-covalent)
FUC.6:
8 residues within 4Å:
Chain A:
L.117
,
R.126
,
E.138
,
M.140
,
T.150
,
I.176
,
Y.192
,
W.198
8
PLIP interactions
:
8 interactions with chain A
Hydrophobic interactions:
A:L.117
,
A:I.176
,
A:Y.192
Hydrogen bonds:
A:R.126
,
A:E.138
,
A:T.150
,
A:T.150
Salt bridges:
A:R.126
1 x
CL
:
CHLORIDE ION
(Non-functional Binders)
CL.7:
1 residues within 4Å:
Chain A:
K.50
Ligand excluded by PLIP
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Houser, J. et al., Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent. Acta Crystallogr.,Sect.D (2015)
Release Date
2013-02-20
Peptides
FUCOSE-SPECIFIC LECTIN FLEA:
A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
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FUCOSE-SPECIFIC LECTIN FLEA
Related Entries With Identical Sequence
4agt.1
|
4ah4.2
|
4aha.1
|
4d4u.1
|
4d52.1
|
4d52.2
|
4d52.3
|
4d52.4
Cartoon
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Tube
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