- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x GAL: beta-D-galactopyranose(Non-covalent)
GAL.2: 9 residues within 4Å:- Chain A: Y.36, H.50, Q.53, D.100, V.101, T.104, N.107
- Ligands: CA.1, CN8.3
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.104, A:N.107
- Water bridges: A:H.50, A:P.51
GAL.7: 9 residues within 4Å:- Chain B: Y.36, H.50, Q.53, D.100, V.101, T.104, N.107
- Ligands: CA.6, CN8.8
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:D.100, B:T.104, B:N.107
- Water bridges: B:H.50, B:P.51, B:T.104, B:G.106
GAL.13: 9 residues within 4Å:- Chain C: Y.36, H.50, Q.53, D.100, V.101, T.104, N.107
- Ligands: CA.12, CN8.14
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:N.107
- Water bridges: C:H.50, C:T.104, C:N.107
GAL.17: 9 residues within 4Å:- Chain D: Y.36, H.50, Q.53, D.100, V.101, T.104, N.107
- Ligands: CA.16, CN8.18
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:T.104, D:T.104, D:N.107
- Water bridges: D:H.50, D:P.51
- 4 x CN8: (4S)-N-ethyl-4-{[N-methyl-3-(1-{2-[(4-sulfanylbenzoyl)amino]ethyl}-1H-1,2,3-triazol-4-yl)-L-alanyl]amino}-L-prolinamide(Non-covalent)
CN8.3: 6 residues within 4Å:- Chain A: Y.36, E.49, H.50, P.51, Q.53
- Ligands: GAL.2
2 PLIP interactions:2 interactions with chain A- Water bridges: A:H.50
- pi-Stacking: A:H.50
CN8.8: 6 residues within 4Å:- Chain B: Y.36, E.49, H.50, P.51, Q.53
- Ligands: GAL.7
1 PLIP interactions:1 interactions with chain B- pi-Stacking: B:H.50
CN8.14: 5 residues within 4Å:- Chain C: Y.36, H.50, P.51, Q.53
- Ligands: GAL.13
1 PLIP interactions:1 interactions with chain C- pi-Stacking: C:H.50
CN8.18: 8 residues within 4Å:- Chain D: Y.36, Q.40, E.49, H.50, P.51, Q.53
- Ligands: GAL.17, SO4.19
2 PLIP interactions:2 interactions with chain D- Water bridges: D:Y.36
- pi-Stacking: D:H.50
- 4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
1PE.4: 5 residues within 4Å:- Chain A: E.11, A.12, K.68, T.95, I.97
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.68
- Water bridges: A:T.95
1PE.9: 6 residues within 4Å:- Chain B: E.11, A.12, K.68, G.70, T.95, I.97
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.68
1PE.15: 4 residues within 4Å:- Chain C: E.11, A.12, K.68, I.97
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:K.68
- Water bridges: C:T.95
1PE.20: 7 residues within 4Å:- Chain D: E.11, A.12, I.56, K.68, N.71, S.72, I.97
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:K.68, D:N.71, D:N.71
- Water bridges: D:T.95
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 3 residues within 4Å:- Chain A: P.38, T.39, Q.40
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.39, A:T.39, A:T.39, A:Q.40
SO4.19: 4 residues within 4Å:- Chain D: P.38, T.39, Q.40
- Ligands: CN8.18
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:T.39, D:T.39, D:Q.40
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Novoa, A. et al., A Leca Ligand Identified from a Galactoside-Conjugate Array Inhibits Host Cell Invasion by Pseudomonas Aeruginosa. Angew.Chem.Int.Ed.Engl. (2014)
- Release Date
- 2014-10-08
- Peptides
- PA-I GALACTOPHILIC LECTIN: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
SMTL ID : 4cp9.1 (4 other biounits)
Crystal structure OF lecA lectin complexed with a divalent galactoside at 1.65 angstrom
PA-I GALACTOPHILIC LECTIN
Toggle Identical (ABCD)Related Entries With Identical Sequence
1l7l.1 | 1oko.1 | 1uoj.1 | 2vxj.1 | 2vxj.2 | 2vxj.3 | 2vxj.4 | 2vxj.5 | 2vxj.6 | 2vxj.7 | 2vxj.8 | 2vxj.9 | 2vxj.10 | 2vxj.11 | 2vxj.12 | 2vxj.13 | 2vxj.14 | 2vxj.15 | 2vxj.16 | 2vxj.17 | 2vxj.18 | 2vxj.19 | 2vxj.20 | 2vxj.21 | 2vxj.22 | 2vxj.23 | 2vxj.24 | 2wyf.1 | 2wyf.2 | 2wyf.3 more...less...2wyf.4 | 2wyf.5 | 2wyf.6 | 4a6s.1 | 4a6s.2 | 4al9.1 | 4al9.2 | 4cp9.2 | 4cp9.3 | 4cp9.4 | 4cp9.5 | 4cpb.1 | 4cpb.2 | 4cpb.3 | 4lk6.1 | 4lk6.2 | 4lk6.3 | 4lk7.1 | 4lk7.2 | 4lk7.3 | 4lkd.1 | 4lkd.2 | 4lke.1 | 4lkf.1 | 4yw6.1 | 4yw7.1 | 4yw7.2 | 4yw7.3 | 4yw7.4 | 4yw7.5 | 4yw7.6 | 4yw7.7 | 4yw7.8 | 4yw7.9 | 4yw7.10 | 4yw7.11 | 4yw7.12 | 4yw7.13 | 4yw7.14 | 4yw7.15 | 4yw7.16 | 4ywa.1 | 4ywa.2 | 5d21.1 | 5mih.1 | 6yo3.1 | 6yoh.1 | 6yoh.2 | 7fio.1 | 7fjh.1 | 7z62.1 | 7z63.1 | 8guv.1