SMTL ID : 4ads.1 (1 other biounit)

Crystal structure of plasmodial PLP synthase complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.61 Å

Oligo State

hetero-12-12-mer

Ligands

24 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: H.116, E.135, R.138, R.139 Chain Q: K.188 Ligand excluded by PLIP PO4.2: 7 residues within 4Å: Chain A: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.3: 5 residues within 4Å: Chain B: H.116, E.135, R.138, R.139 Chain P: K.188 Ligand excluded by PLIP PO4.4: 7 residues within 4Å: Chain B: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.5: 5 residues within 4Å: Chain C: H.116, E.135, R.138, R.139 Chain O: K.188 Ligand excluded by PLIP PO4.6: 7 residues within 4Å: Chain C: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.7: 5 residues within 4Å: Chain D: H.116, E.135, R.138, R.139 Chain N: K.188 Ligand excluded by PLIP PO4.8: 7 residues within 4Å: Chain D: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.9: 5 residues within 4Å: Chain E: H.116, E.135, R.138, R.139 Chain M: K.188 Ligand excluded by PLIP PO4.10: 7 residues within 4Å: Chain E: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.11: 5 residues within 4Å: Chain F: H.116, E.135, R.138, R.139 Chain R: K.188 Ligand excluded by PLIP PO4.12: 7 residues within 4Å: Chain F: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.13: 5 residues within 4Å: Chain E: K.188 Chain M: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.14: 7 residues within 4Å: Chain M: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.15: 5 residues within 4Å: Chain D: K.188 Chain N: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.16: 7 residues within 4Å: Chain N: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.17: 5 residues within 4Å: Chain C: K.188 Chain O: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.18: 7 residues within 4Å: Chain O: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.19: 5 residues within 4Å: Chain B: K.188 Chain P: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.20: 7 residues within 4Å: Chain P: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.21: 5 residues within 4Å: Chain A: K.188 Chain Q: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.22: 7 residues within 4Å: Chain Q: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP PO4.23: 5 residues within 4Å: Chain F: K.188 Chain R: H.116, E.135, R.138, R.139 Ligand excluded by PLIP PO4.24: 7 residues within 4Å: Chain R: A.153, G.154, G.214, G.215, V.235, G.236, S.237 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guedez, G. et al., Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme. Structure (2012)

Release Date

2012-01-25

Peptides

PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE: ABCDEFMNOPQR
PDX2 PROTEIN: GHIJKLSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

M
A

N
B

O
C

P
D

Q
E

R
F

G
G

H
H

I
I

J
J

K
K

L
L

S
G

T
H

U
I

V
J

W
K

X
L

PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE

PDX2 PROTEIN

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