SMTL ID : 4bal.1

Thaumatin from Thaumatococcus daniellii structure in complex with the europium tris-hydroxymethyltriazoledipicolinate complex at 1.30 A resolution.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

3 x HM6: 4-(4-(hydroxymethyl)-1h-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid(Non-covalent)

HM6.1: 4 residues within 4Å: Chain A: R.79 Ligands: HM6.2, HM6.3, EU3.4 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.79 HM6.2: 8 residues within 4Å: Chain A: K.19, G.20, D.21, R.79, F.80 Ligands: HM6.1, HM6.3, EU3.4 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.79, A:F.80 Water bridges: A:K.19, A:G.47, A:G.47 Salt bridges: A:R.79 pi-Cation interactions: A:R.79 HM6.3: 5 residues within 4Å: Chain A: R.82, P.83 Ligands: HM6.1, HM6.2, EU3.4 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.72

1 x EU3: EUROPIUM (III) ION(Non-functional Binders)

EU3.4: 3 residues within 4Å: Ligands: HM6.1, HM6.2, HM6.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talon, R. et al., Clicked Europium Dipicolinate Complexes for Protein X-Ray Structure Determination. Chem.Commun.(Camb.) (2012)

Release Date

2012-11-14

Peptides

THAUMATIN-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

THAUMATIN-1

Related Entries With Identical Sequence