SMTL ID : 4bar.1

Thaumatin from Thaumatococcus daniellii structure in complex with the europium tris-hydroxyethyltriazoledipicolinate complex at 1.20 A resolution.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

3 x IKX: 4-(4-(2-hydroxyethyl)-1H-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid(Non-covalent)

IKX.1: 8 residues within 4Å: Chain A: K.19, G.20, D.21, R.79, F.80 Ligands: IKX.2, IKX.3, EU3.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.80 Salt bridges: A:R.79 pi-Cation interactions: A:R.79 IKX.2: 4 residues within 4Å: Chain A: R.82 Ligands: IKX.1, IKX.3, EU3.4 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.82, A:R.82 IKX.3: 4 residues within 4Å: Chain A: R.79 Ligands: IKX.1, IKX.2, EU3.4 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.79

1 x EU3: EUROPIUM (III) ION(Non-functional Binders)

EU3.4: 3 residues within 4Å: Ligands: IKX.1, IKX.2, IKX.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talon, R. et al., Clicked europium dipicolinate complexes for protein X-ray structure determination. Chem. Commun. (Camb.) (2012)

Release Date

2012-11-14

Peptides

THAUMATIN-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

THAUMATIN-1

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