- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 5PP: 5-PENTYL-2-PHENOXYPHENOL(Non-covalent)
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NAP.2: 30 residues within 4Å:- Chain A: G.39, I.40, A.41, S.45, I.46, R.66, K.67, S.70, I.91, D.92, V.93, S.119, I.120, A.121, F.122, I.146, T.171, T.172, Y.173, K.190, A.216, G.217, P.218, I.219, T.221, L.222, S.223, A.224, F.230
- Ligands: 5PP.1
26 PLIP interactions:26 interactions with chain A- Hydrophobic interactions: A:I.46, A:Y.173, A:Y.173, A:A.216
- Hydrogen bonds: A:G.39, A:I.46, A:R.66, A:K.67, A:S.70, A:S.70, A:D.92, A:D.92, A:V.93, A:I.120, A:A.121, A:K.190, A:I.219, A:I.219, A:S.223
- Water bridges: A:S.119, A:S.119, A:T.171, A:L.222, A:S.223
- Salt bridges: A:R.66, A:K.67
NAP.4: 30 residues within 4Å:- Chain B: G.39, I.40, A.41, S.45, I.46, R.66, K.67, S.70, I.91, D.92, V.93, Q.94, S.119, I.120, A.121, F.122, I.146, T.171, T.172, Y.173, K.190, A.216, G.217, P.218, I.219, T.221, L.222, S.223, F.230
- Ligands: 5PP.3
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:I.46, B:Y.173, B:Y.173, B:A.216
- Hydrogen bonds: B:G.39, B:I.46, B:R.66, B:K.67, B:S.70, B:S.70, B:D.92, B:V.93, B:I.120, B:A.121, B:K.190, B:I.219, B:I.219, B:S.223, B:S.223
- Water bridges: B:A.47, B:R.66, B:S.119, B:T.171, B:L.222, B:S.223
- Salt bridges: B:R.66, B:K.67
NAP.7: 30 residues within 4Å:- Chain C: G.39, I.40, A.41, S.45, I.46, R.66, K.67, S.70, I.91, D.92, V.93, Q.94, S.119, I.120, A.121, F.122, I.146, T.171, T.172, Y.173, K.190, A.216, G.217, P.218, I.219, T.221, L.222, S.223, F.230
- Ligands: 5PP.6
28 PLIP interactions:28 interactions with chain C- Hydrophobic interactions: C:I.46, C:Y.173, C:Y.173, C:A.216
- Hydrogen bonds: C:G.39, C:I.46, C:R.66, C:R.66, C:K.67, C:S.70, C:S.70, C:D.92, C:V.93, C:I.120, C:A.121, C:K.190, C:I.219, C:I.219, C:T.221, C:S.223, C:S.223
- Water bridges: C:N.42, C:S.119, C:S.119, C:T.171
- Salt bridges: C:R.66, C:K.67
- pi-Cation interactions: C:R.66
NAP.10: 30 residues within 4Å:- Chain D: G.39, I.40, A.41, S.45, I.46, R.66, K.67, S.70, I.91, D.92, V.93, Q.94, S.119, I.120, A.121, F.122, I.146, T.171, T.172, Y.173, K.190, A.216, G.217, P.218, I.219, T.221, L.222, S.223, F.230
- Ligands: 5PP.9
27 PLIP interactions:27 interactions with chain D- Hydrophobic interactions: D:I.46, D:Y.173, D:A.216
- Hydrogen bonds: D:G.39, D:I.46, D:R.66, D:R.66, D:K.67, D:S.70, D:D.92, D:V.93, D:I.120, D:A.121, D:K.190, D:I.219, D:I.219, D:T.221, D:S.223, D:S.223
- Water bridges: D:G.39, D:A.47, D:S.70, D:I.120, D:L.222, D:S.223
- Salt bridges: D:R.66, D:K.67
- 2 x GLU: GLUTAMIC ACID(Non-covalent)
GLU.5: 6 residues within 4Å:- Chain B: R.129, G.228, G.229, F.230, N.231, T.232
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.229, B:F.230, B:N.231, B:T.232
- Salt bridges: B:R.129
GLU.8: 5 residues within 4Å:- Chain C: R.129, G.228, G.229, N.231, T.232
6 PLIP interactions:4 interactions with chain C, 2 Ligand-Ligand interactions- Hydrogen bonds: C:G.229, C:N.231, C:T.232, E.8, E.8
- Salt bridges: C:R.129
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, A. et al., Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex. Biochemistry (2013)
- Release Date
- 2013-06-05
- Peptides
- ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 5PP: 5-PENTYL-2-PHENOXYPHENOL(Non-covalent)
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x GLU: GLUTAMIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chang, A. et al., Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex. Biochemistry (2013)
- Release Date
- 2013-06-05
- Peptides
- ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D