SMTL ID : 4bq0.1

Pseudomonas aeruginosa beta-alanine:pyruvate aminotransferase holoenzyme without divalent cations on dimer-dimer interface

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

homo-tetramer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: F.322, S.323 Chain B: M.172, F.173 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: M.172, F.173 Chain B: F.322, S.323 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain C: F.322, S.323 Chain D: M.172, F.173 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain C: M.172, F.173 Chain D: F.322, S.323 Ligand excluded by PLIP

4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)

PLP.2: 13 residues within 4Å: Chain A: S.119, G.120, S.121, Y.153, H.154, G.155, E.226, D.259, V.261, I.262, K.288 Chain B: Y.326, T.327 12 PLIP interactions: 9 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:E.226, A:V.261 Hydrogen bonds: A:G.120, A:S.121, A:K.288, B:T.327, B:T.327 Water bridges: A:S.121, A:Y.153, A:E.226, B:Y.328 pi-Stacking: A:Y.153 PLP.3: 13 residues within 4Å: Chain A: Y.326, T.327 Chain B: S.119, G.120, S.121, Y.153, H.154, G.155, E.226, D.259, V.261, I.262, K.288 10 PLIP interactions: 7 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:E.226, B:V.261 Hydrogen bonds: B:G.120, B:S.121, B:K.288, A:T.327, A:T.327 Water bridges: B:E.226, A:Y.328 pi-Stacking: B:Y.153 PLP.5: 13 residues within 4Å: Chain C: S.119, G.120, S.121, Y.153, H.154, G.155, E.226, D.259, V.261, I.262, K.288 Chain D: Y.326, T.327 12 PLIP interactions: 8 interactions with chain C, 4 interactions with chain D Hydrophobic interactions: C:E.226, C:V.261 Hydrogen bonds: C:S.119, C:G.120, C:S.121, C:K.288, D:T.327, D:T.327, D:T.327 Water bridges: C:E.226, D:Y.328 pi-Stacking: C:Y.153 PLP.7: 13 residues within 4Å: Chain C: Y.326, T.327 Chain D: S.119, G.120, S.121, Y.153, H.154, G.155, E.226, D.259, V.261, I.262, K.288 10 PLIP interactions: 2 interactions with chain C, 8 interactions with chain D Hydrogen bonds: C:T.327, D:G.120, D:S.121, D:K.288 Water bridges: C:Y.328, D:E.226 Hydrophobic interactions: D:E.226, D:V.261, D:V.261 pi-Stacking: D:Y.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lebedev, A.A. et al., Space-Group and Origin Ambiguity in Macromolecular Structures with Pseudo-Symmetry and its Treatment with the Program Zanuda. Acta Crystallogr.,Sect.D (2014)

Release Date

2013-06-05

Peptides

BETA-ALANINE--PYRUVATE TRANSAMINASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

BETA-ALANINE--PYRUVATE TRANSAMINASE

Related Entries With Identical Sequence