SMTL ID : 4bqk.1 (1 other biounit)

rice importin_alpha : VirD2NLS complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: V.94, K.95, L.97, G.98, P.134 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.95, A:G.98, A:G.98 PEG.2: 8 residues within 4Å: Chain A: D.102, D.103, R.105, E.106, H.142, T.143, K.144, M.147 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.102, A:R.105 Water bridges: A:K.144 PEG.3: 8 residues within 4Å: Chain A: L.136, L.139, N.140, E.141, L.148, A.176, R.179, L.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.139, A:R.179, A:R.179 PEG.4: 7 residues within 4Å: Chain A: F.167, R.171, L.174, P.175, A.209, E.212, A.213 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C.-W. et al., Structural Basis of Interaction of Bipartite Nuclear Localization Signal from Agrobacterium Vird2 with Rice Importin-Alpha. Mol.Plant (2014)

Release Date

2014-02-19

Peptides

IMPORTIN SUBUNIT ALPHA-1A: A
T-DNA BORDER ENDONUCLEASE VIRD2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

IMPORTIN SUBUNIT ALPHA-1A

T-DNA BORDER ENDONUCLEASE VIRD2

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