SMTL ID : 4bqk.2 (1 other biounit)

rice importin_alpha : VirD2NLS complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

5 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 3 residues within 4Å: Chain A: L.262, T.266, P.303 No protein-ligand interaction detected (PLIP) PEG.2: 7 residues within 4Å: Chain A: V.94, K.95, L.97, G.98, L.133, P.134, A.137 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.94, A:G.98 PEG.3: 4 residues within 4Å: Chain A: R.160, W.194, Y.198 Chain B: R.16 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.16, B:R.16, A:R.160, A:R.160 PEG.4: 3 residues within 4Å: Chain A: E.398, E.401, N.402 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.398, A:E.401, A:N.402 PEG.5: 7 residues within 4Å: Chain A: Q.293, I.296, N.297, S.331, D.333, Q.334, Y.337 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C.-W. et al., Structural Basis of Interaction of Bipartite Nuclear Localization Signal from Agrobacterium Vird2 with Rice Importin-Alpha. Mol.Plant (2014)

Release Date

2014-02-19

Peptides

IMPORTIN SUBUNIT ALPHA-1A: A
T-DNA BORDER ENDONUCLEASE VIRD2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

IMPORTIN SUBUNIT ALPHA-1A

T-DNA BORDER ENDONUCLEASE VIRD2

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