SMTL ID : 4bst.1

Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P6122 crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.30 Å

Oligo State

hetero-2-2-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA.1: 3 residues within 4Å: Chain B: R.176, S.179, N.201 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.56 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.56 NAG.3: 2 residues within 4Å: Chain A: N.70, S.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.70, A:S.72 NAG.4: 2 residues within 4Å: Chain A: R.176, N.201 No protein-ligand interaction detected (PLIP) NAG.5: 1 residues within 4Å: Chain B: N.70 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, W.C. et al., Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5. Cell Rep. (2013)

Release Date

2013-06-19

Peptides

LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5: AB
R-SPONDIN-1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5

R-SPONDIN-1

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