- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
- 9 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 3 residues within 4Å:- Chain A: Q.205, Q.206, S.207
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.206, A:S.207, A:S.207
- Water bridges: A:S.207
SO4.3: 2 residues within 4Å:- Chain A: Y.208, K.250
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.208
- Salt bridges: A:K.250
SO4.4: 4 residues within 4Å:- Chain A: L.30, Y.223, K.228, Y.263
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.263
- Salt bridges: A:K.228
SO4.5: 4 residues within 4Å:- Chain A: K.5, I.71, G.72, N.98
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.98
- Water bridges: A:K.5, A:K.5, A:N.98
- Salt bridges: A:K.5
SO4.7: 3 residues within 4Å:- Chain B: Q.205, Q.206, S.207
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Q.206, B:S.207, B:S.207
- Water bridges: B:S.207
SO4.8: 4 residues within 4Å:- Chain B: K.5, I.71, G.72, N.98
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:I.71, B:N.98
- Water bridges: B:K.5, B:K.5, B:N.98
- Salt bridges: B:K.5
SO4.9: 3 residues within 4Å:- Chain B: T.83, E.84, N.121
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.84
- Water bridges: B:G.82, B:E.85, B:E.85
SO4.10: 7 residues within 4Å:- Chain B: A.18, H.210, G.211, A.212, G.213, C.214
- Ligands: ACP.6
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:G.211, B:G.211, B:A.212, B:G.213, B:C.214
SO4.11: 2 residues within 4Å:- Chain B: K.185, Y.187
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Y.187
- Water bridges: B:Q.198
- Salt bridges: B:K.185
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nodwell, M.B. et al., A Subfamily of Bacterial Ribokinases Utilizes a Hemithioacetal for Pyridoxal Phosphate Salvage. J.Am.Chem.Soc. (2014)
- Release Date
- 2014-03-19
- Peptides
- PHOSPHOMETHYLPYRIMIDINE KINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
- 9 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nodwell, M.B. et al., A Subfamily of Bacterial Ribokinases Utilizes a Hemithioacetal for Pyridoxal Phosphate Salvage. J.Am.Chem.Soc. (2014)
- Release Date
- 2014-03-19
- Peptides
- PHOSPHOMETHYLPYRIMIDINE KINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D