- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: T.114
- Ligands: ALF.1, GDP.3
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:T.114, H2O.1, H2O.1, H2O.1
MG.5: 4 residues within 4Å:- Chain B: T.88, D.163
- Ligands: ALF.4, GDP.6
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:T.88, H2O.6, H2O.6, H2O.6
- 3 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.3: 23 residues within 4Å:- Chain A: G.110, A.111, G.112, K.113, T.114, T.115, K.119, R.141, Q.147, T.248, K.249, D.251, G.274, V.275, G.276, E.277
- Chain B: N.83, G.84, R.114, L.168
- Ligands: ALF.1, MG.2, ALF.4
26 PLIP interactions:23 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:L.108, A:G.110, A:A.111, A:G.112, A:K.113, A:T.114, A:T.114, A:T.115, A:T.115, A:K.119, A:R.141, A:Q.147, A:Q.147, A:K.249, A:K.249, A:G.276, A:E.277, B:N.83, B:N.83
- Water bridges: A:T.115, A:G.193, B:R.114
- Salt bridges: A:K.113, A:D.251, A:E.277
- pi-Cation interactions: A:K.249
GDP.6: 23 residues within 4Å:- Chain A: Q.109, G.110, R.141, L.195
- Chain B: V.82, G.84, V.85, G.86, K.87, T.88, T.89, K.93, Q.120, T.227, K.228, D.230, G.253, V.254, G.255, E.256
- Ligands: ALF.1, ALF.4, MG.5
27 PLIP interactions:23 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:V.82, B:G.84, B:V.85, B:G.86, B:K.87, B:T.88, B:T.88, B:T.89, B:T.89, B:K.93, B:Q.120, B:Q.120, B:K.228, B:G.255, A:Q.109, A:R.141
- Water bridges: B:T.89, B:D.111, B:R.114, B:R.114, B:R.114, B:G.166, A:R.141, A:G.193
- Salt bridges: B:K.87, B:D.230, B:E.256
GDP.7: 8 residues within 4Å:- Chain A: E.277, K.278
- Chain B: F.113, A.165, G.166, H.173, L.174, E.177
11 PLIP interactions:8 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:G.166, B:E.177, A:K.278
- Water bridges: B:N.83, B:G.166
- pi-Stacking: B:F.113, B:F.113
- pi-Cation interactions: B:F.113, B:H.173
- Salt bridges: A:E.277, A:K.278
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Voigts-Hoffmann, F. et al., The Structural Basis of Ftsy Recruitment and Gtpase Activation by Srp RNA. Mol.Cell (2013)
- Release Date
- 2013-11-20
- Peptides
- SIGNAL RECOGNITION PARTICLE PROTEIN: A
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 3 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Voigts-Hoffmann, F. et al., The Structural Basis of Ftsy Recruitment and Gtpase Activation by Srp RNA. Mol.Cell (2013)
- Release Date
- 2013-11-20
- Peptides
- SIGNAL RECOGNITION PARTICLE PROTEIN: A
SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D