SMTL ID : 4cg4.3 (2 other biounits)

Crystal structure of the CHS-B30.2 domains of TRIM20

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x DHL: 2-AMINO-ETHANETHIOL(Non-covalent)

DHL.1: 11 residues within 4Å: Chain A: F.225, S.227, C.228, I.230, S.264, R.265, K.266, G.267, N.268, M.269, Y.277 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.266 Water bridges: A:S.264 DHL.5: 12 residues within 4Å: Chain B: F.225, S.227, C.228, I.230, I.263, S.264, R.265, K.266, G.267, N.268, M.269, Y.277 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.267

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.241 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.241 SO4.3: 3 residues within 4Å: Chain A: S.203, D.204, D.205 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.204, A:D.205 SO4.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.6: 1 residues within 4Å: Chain B: R.241 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weinert, C. et al., Crystal Structure of Trim20 C-Terminal Coiled-Coil/B30.2 Fragment: Implications for the Recognition of Higher Order Oligomers. Sci.Rep. (2015)

Release Date

2015-04-29

Peptides

PYRIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

PYRIN

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