SMTL ID : 4cim.1 (1 other biounit)

Complex of a Bcl-w BH3 mutant with a BH3 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: L.13, D.16, D.40, L.42, G.43 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.43 Water bridges: A:A.39 EDO.2: 5 residues within 4Å: Chain A: P.8, L.42, W.144, A.145, T.148 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.42, A:T.148 Water bridges: A:A.145 EDO.3: 8 residues within 4Å: Chain A: D.16, P.33, G.34, E.35, G.36, P.37, A.38, R.47 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.16, A:G.34, A:E.35, A:R.47 Water bridges: A:D.16 EDO.4: 4 residues within 4Å: Chain A: Q.76, T.80, W.125, E.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.76, A:T.80, A:T.80, A:E.128 EDO.5: 6 residues within 4Å: Chain A: K.21, Q.24, D.51, E.54, T.55, R.58 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.21, A:D.51, A:E.54, A:R.58, A:R.58 EDO.6: 4 residues within 4Å: Chain A: R.23, S.29, E.35, G.36 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.29, A:G.36 Water bridges: A:G.36 EDO.7: 5 residues within 4Å: Chain A: F.61, Q.67 Chain B: P.4, L.5, A.8 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:P.4, A:Q.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, E.F. et al., The Functional Differences of Pro-Survival and Pro-Apoptotic B Cell Lymphoma 2 (Bcl-2) Proteins Depend on Structural Differences in Their Bcl-2 Homology 3 (Bh3) Domains. J.Biol.Chem. (2014)

Release Date

2014-11-12

Peptides

BCL-2-LIKE PROTEIN 2: A
BCL-2-LIKE PROTEIN 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
Q

BCL-2-LIKE PROTEIN 2

BCL-2-LIKE PROTEIN 2

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