SMTL ID : 4cim.2 (1 other biounit)

Complex of a Bcl-w BH3 mutant with a BH3 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: F.61, Q.67 Chain B: P.4, L.5, A.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.67 EDO.2: 2 residues within 4Å: Chain A: T.132 Ligands: EDO.5 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: L.13, D.40, L.42, G.43 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.40, A:G.43 Water bridges: A:A.39 EDO.4: 7 residues within 4Å: Chain A: D.16, P.33, G.34, E.35, G.36, P.37, R.47 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.34, A:E.35, A:R.47 EDO.5: 6 residues within 4Å: Chain A: Q.76, T.80, W.125, E.128, Y.129 Ligands: EDO.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.76, A:T.80, A:E.128, A:E.128 EDO.6: 3 residues within 4Å: Chain A: D.136, W.137, S.140 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.140, A:S.140 Water bridges: A:W.137 EDO.7: 3 residues within 4Å: Chain A: D.51, E.52, T.55 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.55 Water bridges: A:D.51, A:E.52 EDO.8: 4 residues within 4Å: Chain A: Y.20, G.36, P.37, R.47 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.36 Water bridges: A:R.47 EDO.9: 4 residues within 4Å: Chain A: Y.20, Q.44, R.47, A.48 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.20, A:Y.20 Water bridges: A:Q.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, E.F. et al., The Functional Differences of Pro-Survival and Pro-Apoptotic B Cell Lymphoma 2 (Bcl-2) Proteins Depend on Structural Differences in Their Bcl-2 Homology 3 (Bh3) Domains. J.Biol.Chem. (2014)

Release Date

2014-11-12

Peptides

BCL-2-LIKE PROTEIN 2: A
BCL-2-LIKE PROTEIN 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
P

BCL-2-LIKE PROTEIN 2

BCL-2-LIKE PROTEIN 2

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