SMTL ID : 4ct8.1

Competence or damage-inducible protein CinA from Thermus thermophilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: P.283, G.284, A.285, S.286 Chain B: Y.296, R.377 Ligands: GOL.6 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:Y.296, A:G.284, A:A.285, A:S.286 Salt bridges: B:R.377 SO4.4: 7 residues within 4Å: Chain A: Y.296, R.377 Chain B: P.283, G.284, A.285, S.286 Ligands: GOL.3 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.284, B:A.285, B:S.286 Salt bridges: A:R.377

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: W.183, G.184, I.185, K.211, G.214, R.383 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:W.183, A:G.184, A:I.185, A:I.185, A:K.211, A:G.214, A:R.383, A:R.383 Water bridges: A:V.215 GOL.3: 6 residues within 4Å: Chain A: V.342, A.343, G.344, P.345, D.346 Ligands: SO4.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.343, A:G.344, A:D.346, A:D.346 GOL.6: 7 residues within 4Å: Chain B: G.341, V.342, A.343, G.344, P.345, D.346 Ligands: SO4.1 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.341, B:A.343, B:G.344, B:D.346, B:D.346

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 5 residues within 4Å: Chain B: G.68, G.69, L.70, P.151, G.152 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.69, B:L.70, B:G.71, B:G.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karuppiah, V. et al., Structure and Mechanism of the Bifunctional Cina Enzyme from Thermus Thermophilus. J.Biol.Chem. (2014)

Release Date

2014-10-15

Peptides

CINA-LIKE PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CINA-LIKE PROTEIN

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