SMTL ID : 4cvl.1

PaMurF in complex with AMP-PNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

monomer

Ligands

1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.1: 13 residues within 4Å: Chain A: S.110, S.111, G.112, K.113, T.114, T.115, N.140, E.164, N.189, H.288, N.292 Ligands: MG.2, MG.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.111, A:G.112, A:K.113, A:K.113, A:T.114, A:T.115, A:T.115, A:N.140, A:N.142, A:E.164, A:N.189, A:N.292, A:N.292 pi-Cation interactions: A:H.288

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: T.114, N.140, E.164 Ligands: ACP.1, MG.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.114, A:E.164 MG.3: 4 residues within 4Å: Chain A: T.114, N.140 Ligands: ACP.1, MG.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Majce, V. et al., Pamurf in Complex with AMP-Pnp. To be Published

Release Date

2015-04-22

Peptides

UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE

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