SMTL ID : 4cyu.2 (3 other biounits)

Staphylococcus aureus 7,8-Dihydro-6-hydroxymethylpterin- pyrophosphokinase in complex with AMPCPP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: E.81, R.95, D.98, V.99, D.100 Ligands: APC.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.81, A:D.98, A:D.100, H2O.1 MG.2: 3 residues within 4Å: Chain A: D.98, D.100 Ligands: APC.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.98, A:D.100

1 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)

APC.3: 11 residues within 4Å: Chain A: L.74, R.95, D.98, D.100, I.101, K.113, L.114, S.115, H.118 Ligands: MG.1, MG.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.95, A:R.95, A:D.98, A:I.101, A:I.101, A:S.115 Salt bridges: A:R.95

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.4: 5 residues within 4Å: Chain A: N.30, E.31, Y.32, D.33, I.35 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.31, A:E.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dennis, M.L. et al., Structure-Based Design and Development of Functionalized Mercaptoguanine Derivatives as Inhibitors of the Folate Biosynthesis Pathway Enzyme 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase from Staphylococcus Aureus. J.Med.Chem. (2014)

Release Date

2015-01-28

Peptides

7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN-PYROPHOSPHOKINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN-PYROPHOSPHOKINASE

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