SMTL ID : 4cyy.1

The structure of vanin-1: defining the link between metabolic disease, oxidative stress and inflammation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: T.191, N.193, S.198, D.219, F.220, H.221 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: N.308, T.310, S.311 No protein-ligand interaction detected (PLIP) NAG.3: 3 residues within 4Å: Chain A: G.345, N.346, S.359 2 PLIP interactions: 2 interactions with chain A Water bridges: A:G.345, A:G.345 NAG.4: 1 residues within 4Å: Chain A: N.31 No protein-ligand interaction detected (PLIP) NAG.5: 3 residues within 4Å: Chain A: E.54, K.122, N.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boersma, Y.L. et al., The Structure of Vanin-1: A Key Enzyme Linking Metabolic Disease and Inflammation. Acta Crystallogr.,Sect.D (2014)

Release Date

2014-12-10

Peptides

PANTETHEINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PANTETHEINASE

Related Entries With Identical Sequence