SMTL ID : 4dbn.3 (2 other biounits)

Crystal Structure of the Kinase domain of Human B-raf with a [1,3]thiazolo[5,4-b]pyridine derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

monomer

Ligands

1 x 0JA: 2-chloro-3-(1-cyanocyclopropyl)-N-[5-({2-[(cyclopropylcarbonyl)amino][1,3]thiazolo[5,4-b]pyridin-5-yl}oxy)-2-fluorophenyl]benzamide(Non-covalent)

0JA.1: 22 residues within 4Å: Chain A: V.29, A.39, K.41, E.59, V.62, L.63, T.66, L.72, I.85, T.87, Q.88, W.89, C.90, G.92, L.125, H.132, F.141, I.150, G.151, D.152, F.153, A.156 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.39, A:K.41, A:E.59, A:T.87, A:W.89, A:L.125, A:F.141, A:D.152 Hydrogen bonds: A:K.41, A:E.59, A:C.90, A:C.90, A:D.152 pi-Stacking: A:W.89, A:F.153 Halogen bonds: A:I.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okaniwa, M. et al., Design and synthesis of novel DFG-out RAF/vascular endothelial growth factor receptor 2 (VEGFR2) inhibitors. 1. Exploration of [5,6]-fused bicyclic scaffolds. J.Med.Chem. (2012)

Release Date

2012-04-11

Peptides

Serine/threonine-protein kinase B-raf: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Serine/threonine-protein kinase B-raf

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