SMTL ID : 4dgh.2 (2 other biounits)

Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

36 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 5 residues within 4Å: Chain A: M.62, R.92, K.96 Chain C: T.16, L.17 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: R.55 Chain D: F.30, F.61 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: P.113, G.117 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Ligands: IOD.37 Ligand excluded by PLIP IOD.5: 5 residues within 4Å: Chain A: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: K.96 Ligands: IOD.24 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain A: Q.95, K.99 Ligand excluded by PLIP IOD.9: 1 residues within 4Å: Chain D: K.99 Ligand excluded by PLIP IOD.11: 5 residues within 4Å: Chain B: M.62, R.92, K.96 Chain D: T.16, L.17 Ligand excluded by PLIP IOD.12: 3 residues within 4Å: Chain B: R.55 Chain C: F.30, F.61 Ligand excluded by PLIP IOD.13: 2 residues within 4Å: Chain B: P.113, G.117 Ligand excluded by PLIP IOD.14: 1 residues within 4Å: Ligands: IOD.27 Ligand excluded by PLIP IOD.15: 5 residues within 4Å: Chain B: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.16: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.17: 2 residues within 4Å: Chain B: K.96 Ligands: IOD.34 Ligand excluded by PLIP IOD.18: 2 residues within 4Å: Chain B: Q.95, K.99 Ligand excluded by PLIP IOD.19: 1 residues within 4Å: Chain C: K.99 Ligand excluded by PLIP IOD.21: 5 residues within 4Å: Chain B: T.16, L.17 Chain C: M.62, R.92, K.96 Ligand excluded by PLIP IOD.22: 3 residues within 4Å: Chain A: F.30, F.61 Chain C: R.55 Ligand excluded by PLIP IOD.23: 2 residues within 4Å: Chain C: P.113, G.117 Ligand excluded by PLIP IOD.24: 1 residues within 4Å: Ligands: IOD.7 Ligand excluded by PLIP IOD.25: 5 residues within 4Å: Chain C: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.26: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.27: 2 residues within 4Å: Chain C: K.96 Ligands: IOD.14 Ligand excluded by PLIP IOD.28: 2 residues within 4Å: Chain C: Q.95, K.99 Ligand excluded by PLIP IOD.29: 1 residues within 4Å: Chain A: K.99 Ligand excluded by PLIP IOD.31: 5 residues within 4Å: Chain A: T.16, L.17 Chain D: M.62, R.92, K.96 Ligand excluded by PLIP IOD.32: 3 residues within 4Å: Chain B: F.30, F.61 Chain D: R.55 Ligand excluded by PLIP IOD.33: 2 residues within 4Å: Chain D: P.113, G.117 Ligand excluded by PLIP IOD.34: 1 residues within 4Å: Ligands: IOD.17 Ligand excluded by PLIP IOD.35: 5 residues within 4Å: Chain D: R.55, K.57, S.87, G.88, F.115 Ligand excluded by PLIP IOD.36: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.37: 2 residues within 4Å: Chain D: K.96 Ligands: IOD.4 Ligand excluded by PLIP IOD.38: 2 residues within 4Å: Chain D: Q.95, K.99 Ligand excluded by PLIP IOD.39: 1 residues within 4Å: Chain B: K.99 Ligand excluded by PLIP

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.10: 4 residues within 4Å: Chain A: H.78, K.83, V.106, N.110 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.78, A:V.106, A:N.110 GOL.20: 4 residues within 4Å: Chain B: H.78, K.83, V.106, N.110 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.78, B:V.106, B:N.110 GOL.30: 4 residues within 4Å: Chain C: H.78, K.83, V.106, N.110 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:H.78, C:V.106, C:N.110 GOL.40: 4 residues within 4Å: Chain D: H.78, K.83, V.106, N.110 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:H.78, D:V.106, D:N.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Keller, J.P. et al., Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution. To be Published

Release Date

2012-02-08

Peptides

Sulfate permease family protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

Sulfate permease family protein

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