SMTL ID : 4dl0.2 (1 other biounit)

Crystal Structure of the heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.27, L.28, H.29, E.112, F.113 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.28, A:H.29, A:R.111 SO4.2: 4 residues within 4Å: Chain B: R.30, R.33 Chain C: K.31, I.35 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain B Salt bridges: C:K.31, B:R.30, B:R.33 SO4.3: 2 residues within 4Å: Chain A: E.42 Chain B: R.30 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.30 SO4.4: 3 residues within 4Å: Chain B: H.23, S.27, R.30 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.27 Salt bridges: B:H.23, B:R.30

1 x PBM: TRIMETHYL LEAD ION(Non-covalent)

PBM.5: 1 residues within 4Å: Chain C: E.221 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oot, R.A. et al., Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex. Structure (2012)

Release Date

2012-10-10

Peptides

V-type proton ATPase subunit C: A
V-type proton ATPase subunit G: B
V-type proton ATPase subunit E: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
G

C
E

V-type proton ATPase subunit C

V-type proton ATPase subunit G

V-type proton ATPase subunit E

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