SMTL ID : 4e47.1 (3 other biounits)

SET7/9 in complex with inhibitor (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6- sulfonamide and S-adenosylmethionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 14 residues within 4Å: Chain A: I.115, A.118, G.119, E.120, G.156, N.157, H.185, K.186, A.187, N.188, H.189, Y.227, W.244 Ligands: 0N6.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:E.120, A:E.120, A:G.156, A:N.188, A:N.188, A:H.189, A:H.189 Water bridges: A:E.248 Salt bridges: A:K.186 pi-Stacking: A:W.244, A:W.244

1 x 0N6: (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide(Non-covalent)

0N6.2: 15 residues within 4Å: Chain A: Y.137, H.144, V.147, D.148, N.155, G.156, N.157, T.158, L.159, S.160, Y.197, Y.227, G.228, Y.229 Ligands: SAM.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:N.155, A:Y.227, A:Y.229 Hydrogen bonds: A:H.144, A:S.160, A:G.228, A:G.228 Water bridges: A:D.148

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 2 residues within 4Å: Chain A: C.92, S.94 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.94

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: W.12, Y.14 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.14 Water bridges: A:E.43, A:E.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Walker, J.R. et al., Setd7 in Complex with Inhibitor and SAM. To be Published

Release Date

2012-03-28

Peptides

Histone-lysine N-methyltransferase SETD7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase SETD7

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