SMTL ID : 4e70.1

Crystal Structure Analysis of Coniferyl Alcohol 9-O-Methyltransferase from Linum Nodiflorum in Complex with Coniferyl Alcohol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: H.38, H.39 Chain B: H.38, N.45, H.96, L.97 Ligands: GOL.2 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.45, B:H.96, A:H.38 Water bridges: B:H.38, A:H.38, A:G.337 GOL.2: 5 residues within 4Å: Chain A: H.38, N.45, H.96, L.97 Ligands: GOL.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.45, A:H.96 GOL.4: 8 residues within 4Å: Chain A: D.31 Chain B: S.329, C.330, S.335, G.378, G.379, L.380, R.381 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.379, B:L.380, B:R.381, A:D.31 Water bridges: B:V.377, B:G.378, B:R.381

2 x N7I: 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol(Non-covalent)

N7I.3: 14 residues within 4Å: Chain A: L.138, C.141, S.142, L.147, F.195, M.199, W.288, C.291, D.292, L.342, L.345, F.346, F.349 Chain B: F.40 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.195, A:W.288, A:W.288, A:L.342, A:F.346, A:F.346 Hydrogen bonds: A:S.142, A:D.292 N7I.5: 14 residues within 4Å: Chain A: F.40 Chain B: L.138, C.141, S.142, L.147, F.195, M.199, W.288, C.291, D.292, L.342, L.345, F.346, F.349 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.195, B:W.288, B:W.288, B:L.342, B:F.346, B:F.346 Hydrogen bonds: B:S.142, B:D.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wolters, S. et al., Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a novel active-site environment. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-05-01

Peptides

Coniferyl alcohol 9-O-methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coniferyl alcohol 9-O-methyltransferase

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