SMTL ID : 4e81.2 (1 other biounit)

Crystal structure of the substrate binding domain of E.coli DnaK in complex with a short apidaecin peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: N.120 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.120 SO4.2: 2 residues within 4Å: Chain A: K.114, S.116 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.116 Water bridges: A:A.115 Salt bridges: A:K.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czihal, P. et al., Api88 is a novel antibacterial designer Peptide to treat systemic infections with multidrug-resistant gram-negative pathogens. Acs Chem.Biol. (2012)

Release Date

2012-05-30

Peptides

Chaperone protein DnaK: A
apidaecin peptide fragment: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Chaperone protein DnaK

apidaecin peptide fragment

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