SMTL ID : 4efq.1 (1 other biounit)

Bombyx mori lipoprotein 7 - platinum derivative at 1.94 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.1: 5 residues within 4Å: Chain A: K.37, K.38, S.39, E.40 Ligands: PT.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.39 Water bridges: A:K.37

2 x K: POTASSIUM ION(Non-covalent)

K.2: 2 residues within 4Å: Chain A: H.32, E.36 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.32, A:E.36, A:E.36, H2O.3, H2O.4 K.3: 1 residues within 4Å: Chain A: D.24 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.24, H2O.4

3 x PT: PLATINUM (II) ION(Non-covalent)

PT.4: 1 residues within 4Å: Chain A: M.217 No protein-ligand interaction detected (PLIP) PT.5: 3 residues within 4Å: Chain A: K.37, E.40 Ligands: SCN.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:K.37, A:E.40, A:E.40, H2O.2 PT.6: 1 residues within 4Å: Chain A: H.108 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pietrzyk, A.J. et al., High-resolution structure of Bombyx mori lipoprotein 7: crystallographic determination of the identity of the protein and its potential role in detoxification. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-08-29

Peptides

30kDa protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

30kDa protein

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