- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x KNA: nonanoic acid(Non-covalent)
- 2 x TCE: 3,3',3''-phosphanetriyltripropanoic acid(Non-covalent)
TCE.2: 12 residues within 4Å:- Chain A: L.53, E.57, F.62, H.64, I.79, G.82, C.83, R.86, I.139, S.140, M.146, F.161
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:I.79, A:S.140
- Salt bridges: A:H.64
TCE.6: 12 residues within 4Å:- Chain B: L.53, E.57, F.62, H.64, I.79, G.82, C.83, R.86, I.139, S.140, M.146, F.161
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.57, B:I.79, B:S.140
- Salt bridges: B:H.64
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 3 residues within 4Å:- Chain A: N.110
- Chain D: K.38, S.43
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:N.110, A:N.110, D:K.38
GOL.4: 9 residues within 4Å:- Chain A: F.24, P.25, L.26, R.86, E.93, M.127, S.130, L.131
- Ligands: KNA.1
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.26, A:R.86, A:E.93, A:M.127
- Water bridges: A:S.130
GOL.7: 3 residues within 4Å:- Chain B: N.110
- Chain C: K.38, S.43
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:K.38, B:N.110, B:N.110
GOL.8: 9 residues within 4Å:- Chain B: F.24, P.25, L.26, R.86, E.93, M.127, S.130, L.131
- Ligands: KNA.5
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:L.26, B:R.86, B:E.93, B:M.127
- Water bridges: B:S.130
GOL.12: 9 residues within 4Å:- Chain C: F.24, P.25, L.26, R.86, E.93, M.127, S.130, L.131
- Ligands: KNA.9
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:L.26, C:R.86, C:E.93
- Water bridges: C:S.130
GOL.16: 9 residues within 4Å:- Chain D: F.24, P.25, L.26, R.86, E.93, M.127, S.130, L.131
- Ligands: KNA.13
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:L.26, D:R.86, D:E.93
- Water bridges: D:S.130
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liberato, M.V. et al., Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists. Plos One (2012)
- Release Date
- 2013-03-06
- Peptides
- Peroxisome proliferator-activated receptor gamma: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x KNA: nonanoic acid(Non-covalent)
- 2 x TCE: 3,3',3''-phosphanetriyltripropanoic acid(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liberato, M.V. et al., Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists. Plos One (2012)
- Release Date
- 2013-03-06
- Peptides
- Peroxisome proliferator-activated receptor gamma: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
AD
A