- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
- 15 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
MRD.2: 7 residues within 4Å:- Chain A: E.123, F.124, S.125
- Chain D: S.38, S.40, K.88, V.90
Ligand excluded by PLIPMRD.3: 7 residues within 4Å:- Chain A: D.79, L.80, G.121, F.122, E.123
- Chain B: L.86
- Chain D: P.44
Ligand excluded by PLIPMRD.4: 4 residues within 4Å:- Chain A: K.182, F.186
- Chain B: I.165, I.166
Ligand excluded by PLIPMRD.5: 5 residues within 4Å:- Chain B: I.61, Y.66, N.114, N.171, S.173
Ligand excluded by PLIPMRD.6: 7 residues within 4Å:- Chain A: N.71
- Chain B: E.91, P.94, K.97, I.99, S.137, D.138
Ligand excluded by PLIPMRD.8: 7 residues within 4Å:- Chain C: E.123, F.124, S.125
- Chain F: S.38, S.40, K.88, V.90
Ligand excluded by PLIPMRD.9: 7 residues within 4Å:- Chain C: D.79, L.80, G.121, F.122, E.123
- Chain D: L.86
- Chain F: P.44
Ligand excluded by PLIPMRD.10: 4 residues within 4Å:- Chain C: K.182, F.186
- Chain D: I.165, I.166
Ligand excluded by PLIPMRD.11: 5 residues within 4Å:- Chain D: I.61, Y.66, N.114, N.171, S.173
Ligand excluded by PLIPMRD.12: 7 residues within 4Å:- Chain C: N.71
- Chain D: E.91, P.94, K.97, I.99, S.137, D.138
Ligand excluded by PLIPMRD.14: 7 residues within 4Å:- Chain B: S.38, S.40, K.88, V.90
- Chain E: E.123, F.124, S.125
Ligand excluded by PLIPMRD.15: 7 residues within 4Å:- Chain B: P.44
- Chain E: D.79, L.80, G.121, F.122, E.123
- Chain F: L.86
Ligand excluded by PLIPMRD.16: 4 residues within 4Å:- Chain E: K.182, F.186
- Chain F: I.165, I.166
Ligand excluded by PLIPMRD.17: 5 residues within 4Å:- Chain F: I.61, Y.66, N.114, N.171, S.173
Ligand excluded by PLIPMRD.18: 7 residues within 4Å:- Chain E: N.71
- Chain F: E.91, P.94, K.97, I.99, S.137, D.138
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamashita, S. et al., Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides. Febs Lett. (2012)
- Release Date
- 2012-06-06
- Peptides
- Hemagglutinin components HA-22/23/53: ACE
Hemagglutinin components HA-22/23/53: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
- 15 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamashita, S. et al., Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides. Febs Lett. (2012)
- Release Date
- 2012-06-06
- Peptides
- Hemagglutinin components HA-22/23/53: ACE
Hemagglutinin components HA-22/23/53: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B