SMTL ID : 4f49.1 (3 other biounits)

2.25A resolution structure of Transmissible Gastroenteritis Virus Protease containing a covalently bound Dipeptidyl Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x K36: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid(Covalent)

K36.1: 16 residues within 4Å: Chain A: H.48, I.58, F.146, I.147, A.148, G.149, T.150, C.151, H.169, H.170, L.171, E.172, H.178, D.193, Q.194, P.195 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:H.48, A:I.58, A:E.172 Hydrogen bonds: A:G.149, A:T.150, A:C.151, A:H.170, A:E.172 Water bridges: A:T.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Broad-Spectrum Antivirals against 3C or 3C-Like Proteases of Picornaviruses, Noroviruses, and Coronaviruses. J.Virol. (2012)

Release Date

2012-09-05

Peptides

3C-like proteinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C-like proteinase

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