SMTL ID : 4fa2.1

Human P38 alpha Mitogen-Activated Kinase In Complex With SB239063

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x GG5: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE(Non-covalent)

GG5.1: 13 residues within 4Å: Chain A: P.214, E.215, L.218, W.220, L.259, P.265, L.269, K.272, I.273, I.282, L.314, D.315, S.316 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:P.214, A:E.215, A:L.218, A:L.218, A:W.220, A:P.265, A:L.269, A:L.269, A:I.273, A:I.282, A:L.314, A:L.314 Hydrogen bonds: A:S.316 Water bridges: A:S.274, A:S.274, A:D.317 pi-Stacking: A:W.220

1 x SB0: trans-4-[4-(4-fluorophenyl)-5-(2-methoxypyrimidin-4-yl)-1H-imidazol-1-yl]cyclohexanol(Non-covalent)

SB0.2: 18 residues within 4Å: Chain A: V.53, V.61, A.74, K.76, I.107, L.109, L.127, V.128, T.129, H.130, L.131, M.132, G.133, D.135, S.177, L.190, L.194 Ligands: EDO.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.53, A:K.76, A:T.129, A:L.190, A:L.190 Hydrogen bonds: A:M.132, A:G.133

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: K.76, E.94, L.98, L.190, D.191, F.192 Ligands: SB0.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.76, A:E.94, A:E.94, A:D.191, A:D.191, A:F.192

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.4: 2 residues within 4Å: Chain A: H.149, C.185 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watterson, D.M. et al., Development of Novel In Vivo Chemical Probes to Address CNS Protein Kinase Involvement in Synaptic Dysfunction. Plos One (2013)

Release Date

2013-06-05

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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