SMTL ID : 4fqx.3 (2 other biounits)

Crystal structure of HLA-DM bound to HLA-DR1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain B: V.116, N.118, E.166, W.168 Chain C: G.7, D.8 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pos, W. et al., Crystal Structure of the HLA-DM-HLA-DR1 Complex Defines Mechanisms for Rapid Peptide Selection. Cell(Cambridge,Mass.) (2012)

Release Date

2013-01-09

Peptides

Synthetic peptide: A
HLA class II histocompatibility antigen, DR alpha chain: B
HLA class II histocompatibility antigen, DRB1-1 beta chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
A

C
B

Synthetic peptide

HLA class II histocompatibility antigen, DR alpha chain

HLA class II histocompatibility antigen, DRB1-1 beta chain

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