SMTL ID : 4fuq.4 (3 other biounits)

Crystal structure of apo MatB from Rhodopseudomonas palustris

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: G.396, R.397, G.398, K.399, D.400 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.397, A:K.399, A:D.400 Water bridges: A:D.400, A:K.412 Salt bridges: A:K.399

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: P.82, L.83, N.84, Y.87, L.161, Y.162, Y.206, H.207 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:P.82, A:N.84, A:N.84, A:Y.162, A:H.207 Water bridges: A:Y.87, A:Y.87 GOL.3: 7 residues within 4Å: Chain A: R.271, L.272, F.273, H.294, A.295, Y.313, D.314 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:F.273, A:F.273, A:A.295, A:A.295, A:D.314, A:D.314 GOL.4: 4 residues within 4Å: Chain A: R.447, A.451, T.452, D.454 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.447, A:R.447, A:T.452 GOL.5: 5 residues within 4Å: Chain A: M.1, N.2, A.3, D.151, R.152 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.3, A:R.152, A:R.152 GOL.6: 3 residues within 4Å: Chain A: K.230, F.231, R.255 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:F.231, A:T.251, A:T.251, A:R.255, A:R.255 Water bridges: A:A.202 GOL.7: 1 residues within 4Å: Chain A: E.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crosby, H.A. et al., Structure-Guided Expansion of the Substrate Range of Methylmalonyl Coenzyme A Synthetase (MatB) of Rhodopseudomonas palustris. Appl.Environ.Microbiol. (2012)

Release Date

2012-07-25

Peptides

Malonyl CoA synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Malonyl CoA synthetase

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