SMTL ID : 4fv4.1

Crystal Structure of the ERK2 complexed with EK7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x EK7: 9-(dimethylamino)-2-[(3-hydroxyphenyl)amino]-5,6-dihydrothieno[3,4-h]quinazoline-7-carbonitrile(Non-covalent)

EK7.1: 18 residues within 4Å: Chain A: I.31, G.32, V.39, A.52, K.54, I.84, Q.105, D.106, L.107, M.108, E.109, T.110, D.111, K.114, S.153, L.156, C.166, D.167 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.31, A:A.52, A:K.114, A:L.156, A:L.156 Hydrogen bonds: A:K.54, A:M.108, A:M.108, A:D.167 Water bridges: A:Q.105

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.191, R.194, H.232, Y.233 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.233 Salt bridges: A:R.191, A:R.194 SO4.3: 4 residues within 4Å: Chain A: V.14, R.15, S.29, Y.30 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.15, A:Y.30 SO4.4: 6 residues within 4Å: Chain A: T.63, R.67, R.70, R.148, L.170, R.172 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.66 Salt bridges: A:R.67, A:R.70, A:R.148, A:R.172

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain A: H.61, Q.62, T.63 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.60, A:H.61, A:Q.62, A:T.63, A:T.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kang, Y.N. et al., Crystal Structure of the ERK2 complexed with EK7. TO BE PUBLISHED

Release Date

2012-08-29

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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