SMTL ID : 4fv8.1

Crystal Structure of the ERK2 complexed with E63

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x E63: 6-({4-[(3-cyclopropyl-1H-pyrazol-5-yl)amino]-5-(phenylamino)pyrimidin-2-yl}amino)-1,2-dihydro-3H-indazol-3-one(Non-covalent)

E63.1: 18 residues within 4Å: Chain A: I.31, V.39, A.52, K.54, I.84, Q.105, D.106, L.107, M.108, E.109, T.110, D.111, K.114, S.153, N.154, L.156, C.166, D.167 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.31, A:V.39, A:L.156, A:L.156 Hydrogen bonds: A:K.54, A:M.108, A:M.108, A:M.108, A:M.108, A:D.111, A:D.111, A:S.153, A:N.154, A:D.167

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.15, S.29, Y.30 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.30 SO4.3: 1 residues within 4Å: Chain A: K.342 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.342 SO4.4: 4 residues within 4Å: Chain A: R.70, R.172, V.173, F.331 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.173 Salt bridges: A:R.70, A:R.172 SO4.5: 4 residues within 4Å: Chain A: R.191, R.194, H.232, Y.233 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.233 Salt bridges: A:R.191, A:R.194

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 3 residues within 4Å: Chain A: H.61, Q.62, T.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.62, A:T.63, A:T.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kang, Y.N. et al., Crystal Structure of the ERK2 complexed with E63. TO BE PUBLISHED

Release Date

2012-08-29

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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