SMTL ID : 4fwu.1 (1 other biounit)

Crystal structure of glutaminyl cyclase from drosophila melanogaster in space group I4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-NAG-BMA.1: 4 residues within 4Å: Chain A: E.10, V.11, N.14, W.280 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.280 Water bridges: A:R.284

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: D.103, E.143, H.269 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.103, A:E.143, A:E.143, A:H.269, H2O.14

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 8 residues within 4Å: Chain A: E.142, D.190, L.191, V.242, D.243, D.244, F.264, W.268 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.243, A:W.268 EDO.4: 4 residues within 4Å: Chain A: K.90, K.146, E.147, W.148 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.90, A:K.90, A:W.148 EDO.8: 4 residues within 4Å: Chain A: Y.297, R.300, H.301, V.305 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.300

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 2 residues within 4Å: Chain A: T.149, D.150 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.150 Water bridges: A:T.149, A:A.151 SO4.6: 3 residues within 4Å: Chain A: L.234, S.235, R.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.235 Water bridges: A:S.235 Salt bridges: A:R.236 SO4.7: 4 residues within 4Å: Chain A: R.272, N.274, A.276, N.277 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.274, A:N.274, A:N.277 Salt bridges: A:R.272 SO4.9: 1 residues within 4Å: Chain A: R.236 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.236, A:R.236 Salt bridges: A:R.236 SO4.10: 2 residues within 4Å: Chain A: Q.56, R.57 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.57 Water bridges: A:Q.56, A:Q.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kolenko, P. et al., Structure of glutaminyl cyclase from Drosophila melanogaster in space group I4. Acta Crystallogr.,Sect.F (2013)

Release Date

2012-09-05

Peptides

CG32412: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CG32412

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