SMTL ID : 4g2r.1

Crystal Structure of the carboxyltransferase subunit of ACC (AccD6) in complex with inhibitor haloxyfop from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-dimer

Ligands

4 x H1L: (2R)-2-(4-{[3-chloro-5-(trifluoromethyl)pyridin-2-yl]oxy}phenoxy)propanoic acid(Non-covalent)

H1L.1: 14 residues within 4Å: Chain A: G.98, A.99, L.108, F.115, G.137, G.138, Y.141 Chain B: L.295, Y.326, V.337, G.341, G.366, A.367, A.370 9 PLIP interactions: 2 interactions with chain B, 7 interactions with chain A pi-Stacking: B:Y.326 Halogen bonds: B:V.337 Hydrophobic interactions: A:A.99, A:L.108, A:F.115, A:Y.141, A:Y.141 Hydrogen bonds: A:A.99, A:G.138 H1L.2: 16 residues within 4Å: Chain A: V.131, A.140, P.143, A.144, V.149, M.151, V.157, H.184, H.185, S.188, V.190 Chain B: Q.332, E.333, W.334, G.335, V.338 9 PLIP interactions: 5 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:H.184, A:V.190, A:V.190, B:W.334, B:V.338 Hydrogen bonds: A:S.177, A:S.188, B:W.334, B:G.335 H1L.3: 16 residues within 4Å: Chain A: L.295, Y.326, V.337, G.341, G.366, A.367, A.370, V.391 Chain B: G.98, A.99, L.108, V.111, F.115, G.137, G.138, Y.141 11 PLIP interactions: 3 interactions with chain A, 8 interactions with chain B Water bridges: A:V.391 pi-Stacking: A:Y.326, B:Y.141 Halogen bonds: A:V.337 Hydrophobic interactions: B:A.99, B:L.108, B:V.111, B:F.115, B:Y.141 Hydrogen bonds: B:A.99, B:G.138 H1L.4: 17 residues within 4Å: Chain A: Q.332, E.333, W.334, G.335, V.338 Chain B: V.131, A.140, P.143, V.149, M.151, V.157, V.159, S.177, H.184, H.185, S.188, V.190 8 PLIP interactions: 5 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:A.140, B:H.184, B:V.190, B:V.190, A:W.334 Hydrogen bonds: B:S.177, A:W.334 Water bridges: A:G.335

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reddy, M.C. et al., Structure, Activity, and Inhibition of the Carboxyltransferase beta-Subunit of Acetyl Coenzyme A Carboxylase (AccD6) from Mycobacterium tuberculosis. Antimicrob.Agents Chemother. (2014)

Release Date

2014-02-19

Peptides

AccD6, Carboxyltransferase beta-subunit of Acyl-CoA Carboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AccD6, Carboxyltransferase beta-subunit of Acyl-CoA Carboxylase

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