SMTL ID : 6tzv.4 (3 other biounits)

Crystal Structure of the carboxyltransferase subunit of ACC (AccD6) in complex with inhibitor Phenyl-Cyclodiaone from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

homo-dimer

Ligands

2 x PKP: 4'-[(6-chloro-1,3-benzothiazol-2-yl)oxy]-6-hydroxy-4,4-dimethyl-4,5-dihydro[1,1'-biphenyl]-2(3H)-one(Non-covalent)

PKP.1: 19 residues within 4Å: Chain A: G.98, A.99, L.108, F.115, G.137, G.138, Y.141 Chain B: L.295, A.300, Y.326, G.341, L.344, L.345, G.365, G.366, A.367, I.369, A.370, V.391 13 PLIP interactions: 7 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:L.295, B:I.369, B:A.370, B:V.391, A:L.108, A:Y.141, A:Y.141 Hydrogen bonds: B:G.366, A:A.99, A:G.138 pi-Stacking: B:Y.326, B:Y.326, A:Y.141 PKP.2: 18 residues within 4Å: Chain A: L.295, A.300, Y.326, G.341, L.344, L.345, G.365, G.366, A.367, I.369, A.370, M.392 Chain B: G.98, A.99, F.115, G.137, G.138, Y.141 13 PLIP interactions: 7 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:L.295, A:Y.326, A:I.369, A:A.370, B:A.99, B:Y.141, B:Y.141 Hydrogen bonds: A:G.366, B:A.99, B:G.138 pi-Stacking: A:Y.326, A:Y.326, B:Y.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reddy, M.C.M. et al., Novel herbicidal derivatives that inhibit carboxyltransferase subunit of the acetyl-CoA carboxylase in Mycobacterium tuberculosis. To Be Published

Release Date

2020-08-19

Peptides

Probable propionyl-CoA carboxylase beta chain 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Probable propionyl-CoA carboxylase beta chain 6

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