SMTL ID : 4gb3.4 (4 other biounits)

Human coxsackievirus B3 strain RD coat protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 10 residues within 4Å: Chain A: I.92, P.94, R.95, L.116, Y.143, P.165, M.178, L.210, N.211, M.213 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.92, A:I.92, A:P.94, A:L.116, A:Y.143, A:Y.143 Hydrogen bonds: A:N.211 Salt bridges: A:R.95

1 x MYR: MYRISTIC ACID(Covalent)

MYR.2: 3 residues within 4Å: Chain D: G.1, A.2, I.29 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:I.29 Hydrogen bonds: D:A.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoder, J.D. et al., The Crystal Structure of a Coxsackievirus B3-RD Variant and a Refined 9-Angstrom Cryo-Electron Microscopy Reconstruction of the Virus Complexed with Decay-Accelerating Factor (DAF) Provide a New Footprint of DAF on the Virus Surface. J.Virol. (2012)

Release Date

2012-09-26

Peptides

coat protein 1: A
coat protein 2: B
coat protein 3: C
coat protein 4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

coat protein 1

coat protein 2

coat protein 3

coat protein 4

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