SMTL ID : 4gcw.2 (2 other biounits)

Crystal structure of RNase Z in complex with precursor tRNA(Thr)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: U.74 Chain B: D.67, H.68, D.211, H.269 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.67, B:H.68, B:D.211, B:H.269 ZN.2: 6 residues within 4Å: Chain A: U.74 Chain B: H.63, H.65, H.140, D.211 Ligands: ZN.1 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.63, B:H.65, B:H.140, B:D.211

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 8 residues within 4Å: Chain B: R.30, R.31, S.32, R.54, K.55, E.57, R.79, D.86 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.54, B:D.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pellegrini, O. et al., Activation of tRNA Maturation by Downstream Uracil Residues in B. subtilis. Structure (2012)

Release Date

2012-10-31

Peptides

Ribonuclease Z: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

Ribonuclease Z

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