SMTL ID : 4gjw.2 (1 other biounit)

Structure of the tetramerization domain of Nipah virus phosphoprotein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: D.14 Chain C: R.26, Y.29 No protein-ligand interaction detected (PLIP) GOL.5: 1 residues within 4Å: Chain D: D.25 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:D.25 GOL.6: 3 residues within 4Å: Chain A: R.26, Y.29 Chain D: D.14 No protein-ligand interaction detected (PLIP) GOL.7: 3 residues within 4Å: Chain B: D.14 Chain D: R.26, Y.29 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.14

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain B: E.68 Chain C: R.63, H.66 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: E.68 Chain D: R.63, H.66 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain D: F.20, P.21, H.22 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yabukarski, F. et al., Nipah Virus Phosphoprotein Oligomerisation domain. To be Published

Release Date

2014-02-12

Peptides

Phosphoprotein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
E

C
F

D
G

Phosphoprotein

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