SMTL ID : 4gua.1 (2 other biounits)

Alphavirus P23pro-zbd

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

15 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Q.76, T.100, R.101, K.102, R.530, G.546 Ligand excluded by PLIP SO4.2: 5 residues within 4Å: Chain A: T.13, V.15, C.16, K.19, H.93 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain A: T.69, S.70, N.149, K.554, P.595, S.597 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: P.167, V.168, K.187, I.188, E.189 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain A: P.367, T.394, H.418 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: R.530, T.547, K.548 Ligand excluded by PLIP SO4.7: 5 residues within 4Å: Chain A: K.528, G.529, F.533, S.534, T.535 Ligand excluded by PLIP SO4.8: 2 residues within 4Å: Chain A: R.615, L.619 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain A: S.51, Y.82, W.94, K.249 Ligands: MES.17 Ligand excluded by PLIP SO4.10: 7 residues within 4Å: Chain A: A.28, F.64, Y.105, F.120, A.123, G.124, K.125 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain A: T.33, G.34, C.35 Ligand excluded by PLIP SO4.12: 1 residues within 4Å: Chain A: G.230 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain A: D.86, S.87 Ligand excluded by PLIP SO4.14: 6 residues within 4Å: Chain A: N.173, F.175, K.176, H.177, R.192, K.193 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain A: K.548, H.617, S.621 Ligand excluded by PLIP

3 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.16: 9 residues within 4Å: Chain A: A.364, N.366, G.372, E.373, S.452, T.453, G.454, I.455, Y.456 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.366, A:S.452, A:T.453, A:G.454, A:I.455, A:Y.456 MES.17: 8 residues within 4Å: Chain A: P.49, H.50, S.51, K.249, T.250, R.253, E.513 Ligands: SO4.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.513 Salt bridges: A:K.249 MES.18: 7 residues within 4Å: Chain A: H.522, D.524, M.608, A.610, T.612, E.614, R.615 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:D.524, A:E.614

1 x ZN: ZINC ION(Non-covalent)

ZN.19: 4 residues within 4Å: Chain A: C.605, C.607, C.630, C.648 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.605, A:C.607, A:C.630, A:C.648

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, G. et al., Structural and functional insights into alphavirus polyprotein processing and pathogenesis. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-10-03

Peptides

Non-structural polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-structural polyprotein

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