SMTL ID : 4gua.2 (2 other biounits)

Alphavirus P23pro-zbd

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.528, G.529, S.534, T.535 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.529, A:T.535, A:T.535, A:T.535 SO4.2: 2 residues within 4Å: Chain A: R.221, N.257 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.221 SO4.3: 2 residues within 4Å: Chain A: T.394, H.418 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.394, A:T.394, A:T.394 Salt bridges: A:H.418 SO4.4: 3 residues within 4Å: Chain A: Y.609, R.615, L.619 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.615 SO4.5: 4 residues within 4Å: Chain A: N.173, F.175, R.192, K.193 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.192, A:K.193

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.6: 7 residues within 4Å: Chain A: P.49, H.50, S.51, K.249, T.250, R.253, E.513 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.249 Salt bridges: A:K.249 MES.7: 9 residues within 4Å: Chain A: A.364, A.365, N.366, E.373, S.452, T.453, G.454, I.455, Y.456 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.366, A:S.452, A:T.453, A:G.454, A:Y.456

1 x ZN: ZINC ION(Non-covalent)

ZN.8: 5 residues within 4Å: Chain A: C.605, C.607, C.630, S.632, C.648 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.605, A:C.607, A:C.630, A:C.648

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, G. et al., Structural and functional insights into alphavirus polyprotein processing and pathogenesis. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-10-03

Peptides

Non-structural polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Non-structural polyprotein

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